Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015808525.1_cds_XP_016495370.1_9692
CDS Infomation	[gene=LOC107814463] [db_xref=GeneID:107814463] [protein=putative E3 ubiquitin-protein ligase LIN] [protein_id=XP_016495370.1] [location=complement(join(8466..8483,8790..8906,9150..9275,9340..9486,9576..9686,9825..9947,10043..10174,10474..10593,11123..11244,11940..12234,12784..13029,13470..13611,14249..15418,15508..15578,15703..15951,16154..16226,16608..17356))] [gbkey=CDS]
Sequence	ATGTCACATAATTCAATGGTTTCTGCATCTTCTTCGTCTGCTGTTGCTACCCCTCCTCCT TTCTTTTCATATGATGATGATAAACTAGACCTTGAATCAGTCCGTGCATTCATCGCTGTG ATCAAGCAACATATAACTGAATTTCTTGAAGATACAAAATCTCGAAAATGCTTGAAATTG AAATGCAGTTCAAAGCTTGATGTTTGTAATAGAGGGTACCTTGAATTCTCGGAACAATCA ATATTGTCGAATCTTTATTGGGGGATAGAGAGTATAGAAGCAGCAATTCAAGCAAAATGG AGCGAAGAGAAAACATCAAGGCTACAGAATTCAGAGAACATGCTTCAAGTTCCAGCCTCA CTTGATGAGCAAGGAGAAACAGCCGGAATTCCAAACAATTATTTGGTAGGCTATTCGTAC TTTTACCTCTCCGTTGTTCGAAAGCTCCAAGGAGATGAGTGGCAGGTCGCGATGCATTTT CTTCAAGCTCTTGTGGTTTCTCCTAGGCTTCTTCATACTGAAATTGCTACGGACCTCTGC CAACGTTTGTTTCTCTTAAGCTTTGAGCATGAAGGGAAGGAAACACATTGGAAAGAGTTT ACATCCGCATCTTTTATCAATCTTGATGAGAATGAGGTCTATGTTATGATGGTAAAGATG GCGAGGAGATATAAAGCTTGGCTGATGTATTATCAGATTGTGTCTTCTGGAGAGGGTCCT CTAAGGAATAGTGAATTAGAACAGATAATGAGTAAGAAGTCCAGAAGCACAAGATCTTCA AATTTATGTAAGCATGGAAACGACGGGTGCACCTGTCAAAATTTTGAGAAGGTGCATCCA TGTAATGCCCAAAATGATGCCAAGAATGAGGAAGAAAAGATGATTGTCAAATCCAACGAG TCCATAGAGCAAAATCAGGTAGCTATTACCGACTTAAGGAGTAGTGTAGCAGAAATACCC AAGAACTCAACCACCAAATGCGTCAAAGATATATTACTTGATTCTGAGCCAGAGACACCA ATCTACTTGGATTTCAGCGACAGCGGTTCTGCAAATGAAAATATTCATGAGGAATATGCA GAAGACCTGGAAATCACTTCAAACTGTAGCCTAGAAAACCAGCACACAGAGGCTTTTTAT CAGAACAAGCAATCTTCTCGCTCCTCGTTGTTGTTGGAAAGCTTGGTTTGTAAATCGCAA GTTTCTGGATTAAGGCACAAAGAAGGAAGCCAAGTAGAAATAACTAACTCACTCTCCAGA AGATTCTCCGGTTCATTTACTCATACTGATTTATCAGCAGAAGGAATTAGAAGCCTCAAA ACGCACATAAATTTGAGTGGCAACAATGAAGCTGCAACTATGCAACAGTGCTTACAGATG ATTGATAGTACATCCGACGGATATCCAGTGTCCATGTCTTTACATGATTATCACCTCTGC AAAACACAGTTCCCAAGGATTTCTTCACGGCAAAAGAACAGGTGCAAGAAGACCTTAAAT GAAATATCTGAATATGCTGAAGAAAATTCTCAAGCAGAACAAGCAGCAATACTTGAGAAA ATAATTTCAAAGTTATGTTTCTCAGAAGAGTTTGGGGATTATAAAGACTATACAGTTGAT CTTACAACAATATATGAGTTACTGAATAACAAAACAGGACTTAAATATTCTTTGCTAAAG GACATAATCATTGATCAACTTCTGAGGGCTATATCAACATCCAGAGAAGAACATGTGATA CGGGAATCGGTATCAGTCCTATCAATTATTATTTCAAGGAACAGATCACTTGTTGAGGAT GTCAAGAGGAAAGGGTTACAGTTGAATCATTTGGCAACTGCACTTAAGAAAAATGTTCAT GAAGCGGCTATACTAATATACTTAATAAATCCATCTCCTGCAGAAATCAAGACATTAGAA CTTTTACCATGTCTTGTGGATGTGGTGTGTGCTTCAAACAGTTACAAATGTAGCCTAACA ACACTGCGGATAACACCTCCTGCAGCGTCGTTGATGATTATGGAAGCACTAGTCACTGCA TTTGACTATACATCGAGCGACACACAATTAGCTGTGATCAGCTCACCCAGAGTACTCTCA GGGCTCTTGGATGTCTCAAGGAACAACAACCTCGAAGAAATTATTGCTCTGGCTGCTGTT CTTATCAGATGTATGCAATTCGATGGTCAATGCAGAAAATACATAAACCATTATGCTCCT GTGGCCCCGTTTATATCTCTTTTGAGAAGCAACCATAAGCGCGCAACATCAATTGCACTG GAGTTTTTTCATGAACTGCTGCAAATTCCAAGATCATCAGCCATTCAGGTATTGCAGAAA ATACAAGAAGACGGAAGCAACAACAATATGGGTGCATTACTGCTCCTCATCCAAAAGTCA CAACCAGAGTACAAACTTTTGGCAGCAGATTTGTTGCTTCAGTTAGACATGCTGGAAGAA ACATCTAGTAAATTTGTATACTGTGAAGAGGCTATGGAAGCCGTACTTGCGTCAGTGACA TGTGAAGAGAATTCTGCGACAGAGGCTCTATCAGCATTCATCCTATCCAATTTTGGCGGA ACGTGCTCTTGGTCAGGAGAACCTTACACAATACCATGGTTGCTTAAAAAGGCTGGATTA ACTTCACTGCAACATAAGAACATGATAAAGAATGTTGACTTCTCAGATCAATGTCTACAG GATGTTGGCATAGAGACATGGTGCAGCAAAGTAGCAAAGTGCTTCTTAAGATTTGGAAGT CCTCTCTTCCATGCTTTAGAGAAAGGACTTAAGAGCAATTCGAGGAGCACTTCCCGAGAC TGTCTTGCCGCTACTGCATGGATTGGGTCTGAAATCATGAAAGCCCCAGATGATTTGAGA TATGCAGCCTGTGAGATCTTGCTTAGTAGAATTGAGCAATTTGTGCATCCAGGACTGGAG CTTGAAGAGAGGCTATTAGGATGTCTTTGTATCTATTATTATACTTCCGGAAGAGGGATG AAAAAGTTAGTCAACTTCTCAGAAGGAGTTAGAGAGTCACTAAGACGTCTTTCCAGTATC AGTTGGATGGCAGAAGAATTGCTTAAGGTTGCTGACTATATCCAGCCAAACAAGTGGAGA ATATCTTGTGTTCACACCCAAATTCTCGAGGTGGGAAGCAACCGTAGCGGAGCAGTAACT TCGCTCATCTTCTATAATGGACAGCTTTACAGTGGACATGCAGATGGTTCAATCAAGGCG TGGGACATCAAAGGACAAGCAGCGACACTTGTCCGGGACGTGAAAGAGCATAAAAAGGCT GTGACATGCTTTACCATTTCTGAATCGGGGAATTGCCTGTTGAGTGGATCTGCTGACAAA ACAGTAAAGATTTGGCAAATGCTTGAAAGAAATCTTGAATGCGTAGAGACTATACTGGCG AAAGATCCAATTCAGAATATTAACACACACGGAGAACTGATTTTTGCAATTACCCAAAGC CACAAAATGAAGGTGTTTGATCGATCACGAAAAGCCAGTAAATATTTTACGAATAAATCC GTAAGGTGTGGAATATTGACACACGGAAAGCTTTATGTAGGCTGCACAGATTCAAGCATA CAGGAGCTAGCTATAGCAAACAGCAGGCAGCAAGAGATCAAAGCAGCATCAAAGATTTGG AGTATGAAAAACAAGTCTGTGAACTCATTAGCCATATATAAGGACTGGATATATAGTGCA AGTTCAATGGTTGAAGCTTCACATATAAAGGACTGGAGAAAAAACAAGAAGCCCCAAATA TCAATGACGCCAGAAAAGGGATCCAATGTGTTGGCGATGGAAGTAGTGGAGGACTTCATA TATTTAATTTGCAGCGCATCAATGAGCAACATCCAGATTTGGCTGAGAGGAACACAGCAC AAAGTTGGAAGATTATCAGCAGGCAGCAAGATAACAAGTCTTCTGACAGCAAATGACATA ATTATATGCGGTACAGAAACAGGAATGATTAAGGGTTGGATTCCCCTCTAG

Peptide Sequence

PEP ID	XP_016495370.1
PEP Infomation	PREDICTED: putative E3 ubiquitin-protein ligase LIN [Nicotiana tabacum]
Sequence	MSHNSMVSASSSSAVATPPPFFSYDDDKLDLESVRAFIAVIKQHITEFLEDTKSRKCLKL KCSSKLDVCNRGYLEFSEQSILSNLYWGIESIEAAIQAKWSEEKTSRLQNSENMLQVPAS LDEQGETAGIPNNYLVGYSYFYLSVVRKLQGDEWQVAMHFLQALVVSPRLLHTEIATDLC QRLFLLSFEHEGKETHWKEFTSASFINLDENEVYVMMVKMARRYKAWLMYYQIVSSGEGP LRNSELEQIMSKKSRSTRSSNLCKHGNDGCTCQNFEKVHPCNAQNDAKNEEEKMIVKSNE SIEQNQVAITDLRSSVAEIPKNSTTKCVKDILLDSEPETPIYLDFSDSGSANENIHEEYA EDLEITSNCSLENQHTEAFYQNKQSSRSSLLLESLVCKSQVSGLRHKEGSQVEITNSLSR RFSGSFTHTDLSAEGIRSLKTHINLSGNNEAATMQQCLQMIDSTSDGYPVSMSLHDYHLC KTQFPRISSRQKNRCKKTLNEISEYAEENSQAEQAAILEKIISKLCFSEEFGDYKDYTVD LTTIYELLNNKTGLKYSLLKDIIIDQLLRAISTSREEHVIRESVSVLSIIISRNRSLVED VKRKGLQLNHLATALKKNVHEAAILIYLINPSPAEIKTLELLPCLVDVVCASNSYKCSLT TLRITPPAASLMIMEALVTAFDYTSSDTQLAVISSPRVLSGLLDVSRNNNLEEIIALAAV LIRCMQFDGQCRKYINHYAPVAPFISLLRSNHKRATSIALEFFHELLQIPRSSAIQVLQK IQEDGSNNNMGALLLLIQKSQPEYKLLAADLLLQLDMLEETSSKFVYCEEAMEAVLASVT CEENSATEALSAFILSNFGGTCSWSGEPYTIPWLLKKAGLTSLQHKNMIKNVDFSDQCLQ DVGIETWCSKVAKCFLRFGSPLFHALEKGLKSNSRSTSRDCLAATAWIGSEIMKAPDDLR YAACEILLSRIEQFVHPGLELEERLLGCLCIYYYTSGRGMKKLVNFSEGVRESLRRLSSI SWMAEELLKVADYIQPNKWRISCVHTQILEVGSNRSGAVTSLIFYNGQLYSGHADGSIKA WDIKGQAATLVRDVKEHKKAVTCFTISESGNCLLSGSADKTVKIWQMLERNLECVETILA KDPIQNINTHGELIFAITQSHKMKVFDRSRKASKYFTNKSVRCGILTHGKLYVGCTDSSI QELAIANSRQQEIKAASKIWSMKNKSVNSLAIYKDWIYSASSMVEASHIKDWRKNKKPQI SMTPEKGSNVLAMEVVEDFIYLICSASMSNIQIWLRGTQHKVGRLSAGSKITSLLTANDI IICGTETGMIKGWIPL

Transcript Sequence

Gene sequence data has not been registered.